Posts tagged fruit flies

Posts tagged fruit flies
How female fruit flies know when to say ‘yes’
A fundamental question in neurobiology is how animals, including humans, make decisions. A new study publishing in the open access journal PLOS Biology on October 7 reveals how fruit fly females make a very important decision: to either accept or reject male courtship. This decision appears to be generated by a very small number of excitatory neurons that use acetylcholine as their neurotransmitter located in three brain regions. This study provides the framework to understand how decisions are generated and suggests that a decision is reached because that option is literally the most exciting.
New York University biologists have identified a mechanism that helps explain how the diversity of neurons that make up the visual system is generated.

“Our research uncovers a process that dictates both timing and cell survival in order to engender the heterogeneity of neurons used for vision,” explains NYU Biology Professor Claude Desplan, the study’s senior author.
The study’s other co-authors were: Claire Bertet, Xin Li, Ted Erclik, Matthieu Cavey, and Brent Wells—all postdoctoral fellows at NYU.
Their work, which appears in the latest issue of the journal Cell, centers on neurogenesis—the process by which neurons are created.
A central challenge in developmental neurobiology is to understand how progenitors—stem cells that differentiate to form one or more kinds of cells—produce the vast diversity of neurons, glia, and non-neuronal cells found in the adult Central Nervous System (CNS). Temporal patterning is one of the core mechanisms generating this diversity in both invertebrates and vertebrates. This process relies on the sequential expression of transcription factors into progenitors, each specifying the production of a distinct neural cell type.
In the Cell paper, the researchers studied the formation of the visual system of the fruit fly Drosophila. Their findings revealed that this process, which relies on temporal patterning of neural progenitors, is more complex than previously thought.
They demonstrate that in addition to specifying the production of distinct neural cell type over time, temporal factors also determine the survival or death of these cells as well as the mode of division of progenitors. Thus, temporal patterning of neural progenitors generates cell diversity in the adult visual system by specifying the identity, the survival, and the number of each unique neural cell type.
(Source: nyu.edu)
A team of scientists has identified the neurons used in certain types of motion detection—findings that deepen our understanding of how the visual system functions.

“Our results show how neurons in the brain work together as part of an intricate process used to detect motion,” says Claude Desplan, a professor in NYU’s Department of Biology and the study’s senior author.
The study, whose authors included Rudy Behnia, an NYU post-doctoral fellow, as well as researchers from the NYU Center for Neural Science and Yale and Stanford universities, appears in the journal Nature.
The researchers sought to explain some of the neurological underpinnings of a long-established and influential model, the Hassenstein–Reichardt correlator. It posits that motion detection relies on separate input channels that are processed in the brain in ways that coordinate these distinct inputs. The Nature study focused on neurons acting in this processing.
The researchers examined the fruit fly Drosophila, which is commonly used in biological research as a model system to decipher basic principles that direct the functions of the brain.
Previously, scientists studying Drosophila have identified two parallel pathways that respond to either moving light, or dark edges—a dynamic that underscores much of what flies see in detecting motion. For instance, a bird is an object whose dark edges flies see as it first moves across the bright light of the sky; after it passes through their field of view, flies see the light edge of the background sky.
However, the nature of the underlying neurological processing had not been clear.
In their study, the researchers analyzed the neuronal activity of particular neurons used to detect these movements. Specifically, they found that four neurons in the brain’s medulla implement two processing steps. Two neurons— Tm1 and Tm2—respond to brightness decrements (central to the detection of moving dark edges); by contrast, two other neurons— Mi1 and Tm3—respond to brightness increments (or light edges). Moreover, Tm1 responds slower than does Tm2 while Mi1 responds slower than does Tm3, a difference in kinetics that fundamental to the Hassenstein-Reichardt correlator.
In sum, these neurons process the two inputs that precede the coordination outlined by the Hassenstein–Reichardt correlator, thereby revealing elements of the long-sought neural activity of motion detection in the fly.
(Source: nyu.edu)

Fruit fly research may reveal what happens in female brains during courtship and mating
What are the complex processes in the brain involved with choosing a mate, and are these processes different in females versus males? It’s difficult to study such questions in people, but researchers are finding clues in fruit flies that might be relevant to humans and other animals. Three different studies on the topic are being published in the Cell Press journals Neuron (1, 2) and Current Biology.
Work over the past 100 years has largely focused on the overt courtship behaviors that male flies direct toward females. However, the female ultimately decides whether to reject the male or copulate with him. How does the female make this decision? In one Neuron paper, researchers report that they have identified two small groups of neurons in the female brain that function to modulate whether she will mate or not with a male based on his distinct pheromones and courtship song. In this paper, a team led by Dr. Bruce Baker of the Howard Hughes Medical Institute’s Janelia Farm Research Campus in Virginia also reports that these neurons are genetically distinct from the previously identified neurons that function to drive the elaborate courtship ritual with which a male woos a female. “An understanding of the neural mechanisms underlying how sensory information elicits appropriate sexual behaviors can be used as a point of comparison for how similar sexual behavior circuits are structured and function in other species,” says Dr. Baker.
In the Current Biology study, Dr. Leslie Vosshall of The Rockefeller University in New York City and her team found that a small group of neurons in the abdominal nerve cord and reproductive tract—called Abdominal-B neurons—is necessary for the female to pause her movement and interact with a courting male. When the neurons are inactivated, the female ignores the male and keeps moving, but when the neurons are activated, the female spontaneously pauses. “Sexual courtship is a duet—the male and female send signals back and forth until they reach the point that copulation proceeds,” says Dr. Jennifer Bussell, the lead author of the study. “Pausing to interact with a male, rather than avoiding him, is a crucial step in any female’s behavior leading to copulation. Tying a group of neurons to this particular response to males will allow us to dissect in detail how female mating circuitry functions.”
In another Neuron paper, researchers studied the effects of a small protein called sex peptide that is transferred along with sperm from males to females and is detected by sensory neurons in the uterus. Sex peptide changes the female’s behavior so that she is reluctant to mate again for about10 days. The investigators traced the neuronal pathway that is modulated when the uterus’s sensory neurons detect sex peptide. “Thanks to our work, we think the sex peptide signal goes to a region of the fly’s brain that is the homolog of the hypothalamus, which has been know for many years to be central in controlling sexual receptivity in vertebrates,” explains co-lead author Dr. Mark Palfreyman of the Research Institute of Molecular Pathology in Vienna, Austria. This region of the brain links the nervous system to the endocrine, or hormonal, system. “Of course, these models will still need to be tested and our work only provides an initial glimpse, but our study opens the possibility that analogous neuroendocrine systems control sexual receptivity from flies to vertebrates,” adds senior author Dr. Barry Dickson, who was also a co-author on the Current Biology paper published by Dr. Vosshall.
Fighting off illness- rather than the illness itself- causes sleep deprivation and affects memory, a new study has found.
University of Leicester biologist Dr Eamonn Mallon said a common perception is that if you are sick, you sleep more.
But the study, carried out in flies, found that sickness induced insomnia is quite common.

The research has been published in the journal PeerJ.
Dr Mallon said: “Think about when you are sick. Your sleep is disturbed and you’re generally not feeling at your sharpest. Previously work has been carried out showing that being infected leads to exactly these behaviours in fruit flies.
“In this paper we show that it can be the immune system itself that can cause these problems. By turning on the immune system in flies artificially (with no infection present) we reduced how long they slept and how well they performed in a memory test.
“This is an interesting result as these connections between the brain and the immune system have come to the fore recently in medicine. It seems to be because the two systems speak the same chemical language and often cross-talk. Having a model of this in the fly, one of the main systems used in genetic research will be a boost to the field.
“The key message of this study is that the immune response, sleep and memory seem to be intimately linked. Medicine is beginning to study these links between the brain and the immune system in humans. Having an easy to use insect model would be very helpful.”
(Source: www2.le.ac.uk)
How neurons are created and integrate with each other is one of biology’s greatest riddles. Researcher Dietmar Schmucker from VIB-KU Leuven unravels a part of the mystery in Science magazine. He describes a mechanism that explains novel aspects of how the wiring of highly branched neurons in the brain works. These new insights into how complex neural networks are formed are very important for understanding and treating neurological diseases.

Neurons, or nerve cells
It is estimated that a person has 100 billion neurons, or nerve cells. These neurons have thin, elongated, highly branched offshoots called dendrites and axons. They are the body’s information and signal processors. The dendrites receive electrical impulses from the other neurons and conduct these to the cell body. The cell body then decides whether stimuli will or will not be transferred to other cells via the axon.
The brain’s wiring is very complex. Although the molecular mechanisms that explain the linear connection between neurons have already been described numerous times, little is as yet known about how the branched wiring works in the brain.
The connections between nerve cells
Prior research by Dietmar Schmucker and his team lead to the identification of the Dscam1 protein in the fruit fly. The neuron can create many different protein variations, or isoforms, from this same protein. The specific set of isoforms that occurs on a neuron’s cell surface determines the neuron’s unique molecular identity and plays an important role in the establishment of accurate connections. In other words, it describes why certain neurons either come into contact with each other or reject each other.
Recent work by Haihuai He and Yoshiaki Kise from Dietmar’s team indicates that different sets of Dscam1 isoforms occur inside one axon, between the newly formed offshoots amongst each other. If this was not the case, then only linear connections could come about between neurons. These results indicate for the first time the significance of why different sets of the same protein variations can occur in one neuron and it could explain mechanistically how this contributes to the complex wiring in our brain.
Clinical impact
Although this research was done with fruit flies, it also provides new insights that help explain the wiring and complex interactions of the human brain and shine a new light on neurological development disorders such as autism. Thorough knowledge of nerve cell creation and their neural interactions is considered essential knowledge for the future possibility of using stem cell therapy as standard treatment for certain nervous system disorders.
Questions
Given that this research can raise many questions, we would like to refer your questions in your report or article to the email address that the VIB has made available for this purpose. All questions regarding this and other medical research can be directed to: patients@vib.be.
Relevant scientific publication
The above-mentioned research was published in the prominent magazine Science.
(Source: vib.be)

Quick Getaway: How Flies Escape Looming Predators
When a fruit fly detects an approaching predator, the fly can launch itself into the air and soar gracefully to safety in a fraction of a second. But there’s not always time for that. Some threats demand a quicker getaway. New research from scientists at Howard Hughes Medical Institute’s Janelia Research Campus reveals how a quick-escape circuit in the fly’s brain overrides the fly’s slower, more controlled behavior when a threat becomes urgent.
“The fly’s rapid takeoff is, on average, eight milliseconds faster than its more controlled takeoff,” says Janelia group leader Gwyneth Card. “Eight milliseconds could be the difference between life and death.”
Card studies escape behaviors in the fruit fly to unravel the circuits and processes that underlie decision making, teasing out how the brain integrates information to respond to a changing environment. Her team’s new study, published online June 8, 2014, in the journal Nature Neuroscience, shows that two neural circuits mediate fruit flies’ slow-and-stable or quick-but-clumsy escape behaviors. Card, postdoctoral researcher Catherine von Reyn, and their colleagues find that a spike of activity in a key neuron in the quick-escape circuit can override the slower escape, prompting the fly to spring to safety when a threat gets too near.
A pair of neurons—called giant fibers—in the fruit fly brain has long been suspected to trigger escape. Researchers can provoke this behavior by artificially activating the giant fiber neurons, but no one had actually demonstrated that those neurons responded to visual cues associated with an approaching predator, Card says. She was curious how the neurons could be involved in the natural behavior if they didn’t seem to respond to the relevant sensory cues, so she decided to test their role.
Genetic tools developed in the lab of Janelia executive director Gerald Rubin enabled Card’s team to switch the giant fiber neurons on or off, and then observe how flies responded to a predator-like stimulus. They conducted their experiments in an apparatus developed in Card’s lab that captures videos of individual flies as they are exposed to a looming dark circle. The image is projected onto a hemispheric surface and expands rapidly to fill the fly’s visual field, simulating the approach of a predator. “It’s really like a domed IMAX for the fly,” Card explains. A high-speed camera records the response at 6,000 frames per second, allowing Card and her colleagues to examine in detail the series of events that make up the fly’s escape.
To ensure their experiments were relevant to fruit flies’ real-world experiences, Card teamed with fellow Janelia group leader Anthony Leonardo to record and analyze the trajectories and acceleration of damselflies—natural predators of the fruit fly—as they attacked. They designed their looming stimulus to mimic these features. “We wanted to make sure we were really challenging the animal with something that was like a predator attack,” Card says.
By analyzing more than 4,000 flies, Card and her colleagues discovered two distinct responses to the simulated predator: long and short escapes. To prepare for a steady take-off, flies took the time to raise their wings fully. Quicker escapes, in contrast, eliminated this step, shaving time off the take-off but often causing the fly to tumble through the air.
When the scientists switched off the giant fiber neurons, preventing them from firing, flies still managed to complete their escape sequence. “On a surface level evaluation, silencing the neuron had absolutely no effect,” Card says. “You can do away with this neuron that people thought was fundamental to this escape behavior, and flies still escape.” Shorter escapes, however, were completely eliminated. Flies without active giant fiber neurons invariably opted for the slower, steadier escape. In contrast, when the scientists switched giant fiber neurons on in the absence of a predator-like stimulus, flies enacted their quick-escape behavior. The evidence suggested the giant fiber neurons were involved only in short escapes, while a separate circuit mediated the long escapes.
Card and her colleagues wanted to understand how flies decide when to sacrifice stability in favor of a quicker response. To learn more, Catherine von Reyn, a postdoctoral researcher in Card’s lab, set up experiments in which she could directly monitor activity in the giant fiber neurons. Surprisingly, she discovered that the giant fibers were not only active in short-mode escape, but also during some of the long-mode escapes. The situation was more complicated than their genetic experiments had suggested. “Seeing the dynamics of the electrophysiology allowed us to understand that the timing of the spike is important is determining the fly’s choice of escape behavior,” Card says.
Based on their data, Card and von Reyn propose that a looming stimulus first activates a circuit in the brain that initiates a slow escape, beginning with a controlled lift of the wings. When the object looms closer, filling more of the fly’s field of view, the giant fiber activates, prompting a more urgent escape. “What determines whether a fly does a long-mode or a short-mode escape is how soon after the wings go up the fly kicks its legs and it starts to take off,” Card says. “The giant fiber can fire at any point during that sequence. It might not fire at all—in which case you get this nice long, beautifully choreographed takeoff. It might fire right away, in which case you get an abbreviated escape.” The more quickly an object approaches, the sooner the giant fiber is likely to fire, increasing the probability of a short escape.
Card remains curious about many aspects of escape behavior. How does a fly calculate the orientation of a threat and decide in which direction to flee, she wonders. What makes a fly decide to initiate a takeoff as opposed to other evasive maneuvers? The relatively compact circuits that control these sensory-driven behaviors provide a powerful system for exploring the mechanisms that animals use to selecting one behavior over another, she says. “We think that you can really ask these questions at the level of individual neurons, and even individual spikes in those neurons.”
Brain traffic jams that can disappear in 30 seconds
Motorists in Los Angeles, San Francisco and other gridlocked cities could learn something from the fruit fly.
Scientists have found that cellular blockages, the molecular equivalent to traffic jams, in nerve cells of the insect’s brain can form and dissolve in 30 seconds or less.
The findings, presented in the journal PLOS ONE, could provide scientists much-needed clues to better identify and treat neurodegenerative diseases such as Alzheimer’s and Huntington’s.
“Our research suggests that fixed, permanent blocks may impede the transport of important cellular components and, ultimately, lead to cellular degeneration and death,” says lead researcher Shermali Gunawardena, PhD, an assistant professor of biological sciences in the University at Buffalo’s College of Arts and Sciences. “Conversely, blocks that resolve themselves may be benign.”
She continues: “This is an important distinction that could help researchers decide which kind or type of blocks to focus on when developing drugs and other forms of therapy for some of these debilitating diseases.”
Scientists have long known that many essential cellular components are transported along tracts of nerve cells called neuronal pathways, and that these movements are required for the growth, function and maintenance of neurons. Only recently, however, have they been able to understand the many proteins that help control these movements.
In the UB study, researchers examined isolated nerve cells from fruit fly larvae. Neuronal pathways of these larvae are similar to neuronal pathways in humans.
Traditionally, researchers have identified blockages through still images of dead larvae. These images provide a snapshot only, instead of a depiction of the behavior of the accumulated components over distinct periods of time.
UB researchers altered the approach by analyzing the neuronal pathways of living larvae. Unlike the still images, this method shows how the transport of components changes as neuronal pathways evolve over time.
The researchers found that certain blockages form and dissolve rather quickly. For example, one blockage appeared and disappeared within 29 seconds. Its relatively short life, Gunawardena said, indicates that the blockage is likely benign and not harmful to the cell.
The distinction is significant, she said, because it could allow researchers to focus on permanent blockages that likely halt cellular movement and may pose more serious health risks.
Researchers also looked at how the transport of essential materials over several days contributed to the growth of neurons. If transport was disrupted, growth of the neuron was compromised. As the neuron grew, the movement of some components carrying synaptic proteins increased while other components did not show significant changes.
This suggests that the transport of components in neuronal pathways is linked to the growth and function of the nerve cell.
Taken together, the findings suggest that more research must be conducted to better understand the spatial and temporal characteristics of how essential materials are transported within neurons of living organisms. This, in turn, will provide clues into how defects in this system can lead to neurodegenerative diseases and, perhaps, better ways to identify and treat these ailments.
Fruit flies ‘think’ before they act
Oxford University neuroscientists have shown that fruit flies take longer to make more difficult decisions.
In experiments asking fruit flies to distinguish between ever closer concentrations of an odour, the researchers found that the flies don’t act instinctively or impulsively. Instead they appear to accumulate information before committing to a choice.
Gathering information before making a decision has been considered a sign of higher intelligence, like that shown by primates and humans.
'Freedom of action from automatic impulses is considered a hallmark of cognition or intelligence,' says Professor Gero Miesenböck, in whose laboratory the new research was performed. 'What our findings show is that fruit flies have a surprising mental capacity that has previously been unrecognised.'
The researchers also showed that the gene FoxP, active in a small set of around 200 neurons, is involved in the decision-making process in the fruit fly brain.
The team reports its findings in the journal Science. The group was funded by the Wellcome Trust, the Gatsby Charitable Foundation, the US National Institutes of Health and the Oxford Martin School.
The researchers observed Drosophila fruit flies make a choice between two concentrations of an odour presented to them from opposite ends of a narrow chamber, having been trained to avoid one concentration.
When the odour concentrations were very different and easy to tell apart, the flies made quick decisions and almost always moved to the correct end of the chamber.
When the odour concentrations were very close and difficult to distinguish, the flies took much longer to make a decision, and they made more mistakes.
The researchers found that mathematical models developed to describe the mechanisms of decision making in humans and primates also matched the behaviour of the fruit flies.
The scientists discovered that fruit flies with mutations in a gene called FoxP took longer than normal flies to make decisions when odours were difficult to distinguish – they became indecisive.
The researchers tracked down the activity of the FoxP gene to a small cluster of around 200 neurons out of the 200,000 neurons in the brain of a fruit fly. This implicates these neurons in the evidence-accumulation process the flies use before committing to a decision.
Dr Shamik DasGupta, the lead author of the study, explains: ‘Before a decision is made, brain circuits collect information like a bucket collects water. Once the accumulated information has risen to a certain level, the decision is triggered. When FoxP is defective, either the flow of information into the bucket is reduced to a trickle, or the bucket has sprung a leak.’
Fruit flies have one FoxP gene, while humans have four related FoxP genes. Human FoxP1 and FoxP2 have previously been associated with language and cognitive development. The genes have also been linked to the ability to learn fine movement sequences, such as playing the piano.
'We don't know why this gene pops up in such diverse mental processes as language, decision-making and motor learning,' says Professor Miesenböck. However, he speculates: 'One feature common to all of these processes is that they unfold over time. FoxP may be important for wiring the capacity to produce and process temporal sequences in the brain.'
Professor Miesenböck adds: ‘FoxP is not a “language gene”, a “decision-making gene”, even a “temporal-processing” or “intelligence” gene. Any such description would in all likelihood be wrong. What FoxP does give us is a tool to understand the brain circuits involved in these processes. It has already led us to a site in the brain that is important in decision-making.’
Perhaps one of the keys to good health isn’t just what you eat but how you taste it.

Taste buds – yes, the same ones you may blame for that sweet tooth or French fry craving – may in fact have a powerful role in a long and healthy life – at least for fruit flies, say two new studies that appear in the Proceedings of the National Academy of Sciences of the United States of America.
Researchers from the University of Michigan, Wayne State University and Friedrich Miescher Institute for Biomedical Research in Switzerland found that suppressing the animal’s ability to taste its food –regardless of how much it actually eats – can significantly increase or decrease its length of life and potentially promote healthy aging.
Bitter tastes could have negative effects on lifespan, sweet tastes had positive effects, and the ability to taste water had the most significant impact – flies that could not taste water lived up to 43% longer than other flies. The findings suggest that in fruit flies, the loss of taste may cause physiological changes to help the body adapt to the perception that it’s not getting adequate nutrients.
In the case of flies whose loss of water taste led to a longer life, authors say the animals may attempt to compensate for a perceived water shortage by storing greater amounts of fat and subsequently using these fat stores to produce water internally. Further studies are planned to better explore how and why bitter and sweet tastes affect aging.
“This brings us further understanding about how sensory perception affects health. It turns out that taste buds are doing more than we think,” says senior author of the University of Michigan-led study Scott Pletcher, Ph.D., associate professor in the Department of Molecular and Integrative Physiology and research associate professor at the Institute of Gerontology.
“We know they’re able to help us avoid or be attracted to certain foods but in fruit flies, it appears that taste may also have a very profound effect on the physiological state and healthy aging.”
Pletcher conducted the study with lead author Michael Waterson, a Ph.D graduate student in U-M’s Cellular and Molecular Biology Program.
“Our world is shaped by our sensory abilities that help us navigate our surroundings and by dissecting how this affects aging, we can lay the groundwork for new ideas to improve our health,” says senior author of the other study, Joy Alcedo, Ph.D, assistant professor in the Department of Biological Sciences at Wayne State University, formerly of the Friedrich Miescher Institute for Biomedical Research in Switzerland. Alcedo conducted the research with lead author Ivan Ostojic, Ph.D., of the Friedrich Miescher Institute for Biomedical Research in Switzerland.
Recent studies suggest that sensory perception may influence health-related characteristics such as athletic performance, type II diabetes, and aging. The two new studies, however, provide the first detailed look into the role of taste perception.
“These findings help us better understand the influence of sensory signals, which we now know not only tune an organism into its environment but also cause substantial changes in physiology that affect overall health and longevity,” Waterson says. “We need further studies to help us apply this knowledge to health in humans potentially through tailored diets favoring certain tastes or even pharmaceutical compounds that target taste inputs without diet alterations.”
(Source: uofmhealth.org)